|
Primers used for qPCR experiments: |
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| Name |
Rat gene symbol |
Rat gene ID |
Rat mRNA reference |
Primers Forward, reverse |
Predicted size (bp) |
Position in mRNA |
|
|
||||||
| Nav 1.1 |
Scn1a |
81574 |
NM_030875.1 |
atccgagtccgaagatagca |
137 |
1817..1953 |
| gtctcggggaaaacagtgag |
||||||
| Nav 1.2 |
Scn2a1 |
24766 |
NM_012647.1 |
cggagagttcgtcagtagcc |
229 |
1661..1889 |
| aagagagactggtgcggaga |
||||||
| Nav 1.3 |
Scn3a |
81574 |
NM_013119.1 |
aacttggtgccatcaaatcc |
182 |
4513..4334 |
| cagattcacacccatgatgc |
||||||
| Nav 1.4 |
Scn4a |
25722 |
NM_013178.1 |
caccgctcttctctgcttct |
282 |
23..304 |
| gtgggtgtcctggtcttgtt |
||||||
| Nav 1.5 |
Scn5a |
25665 |
NM_013125.1 |
ttctagctcgaggcttctgc |
132 |
727..858 |
| tgcgtaaggctgagacattg |
||||||
| Nav 1.6 |
Scn8a |
29710 |
NM_019266.2 |
tacagtggctacagcggcta |
274 |
2008..2281 |
| tgtttgtgaccacgctcatt |
||||||
| Nav 1.7 |
Scn9a |
78956 |
NM_133289 |
gacagcttcttccagaggtgataata |
215 |
1922..2024 |
| ccatggtggacatttttgtct |
||||||
| Nav 1.8 |
Scn10a |
29571 |
XM_001078257 |
cacggatgacaacaggtcac |
151 |
1610..1760 |
| gatcccgtcaggaaatgaga |
||||||
| Nav 1.9 |
Scn11a |
29701 |
NM_019265 |
ggcagccaagtcaatctttc |
233 |
679..911 |
| gggccacagttgtgcttaat |
||||||
| HPRT |
Hprt |
24465 |
NM_012583 |
gcagactttgctttccttgg |
278 |
495..772 |
| tactggccacatcaacagga |
||||||
Wang et al. Molecular Pain 2008 4:38 doi:10.1186/1744-8069-4-38 |
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